STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96189.1Bacterial transferase hexapeptide repeat protein; KEGG: reh:H16_B0032 1.6e-55 wbpD; acetyltransferase K00680; Psort location: Cytoplasmic, score: 9.26. (191 aa)    
Predicted Functional Partners:
EEC97786.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: ava:Ava_0899 3.5e-74 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme K00811; Psort location: Cytoplasmic, score: 8.96; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.955
EEC95492.1
Phosphotransferase enzyme family; KEGG: bte:BTH_I0574 4.0e-14 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
    
 0.850
prs
KEGG: pgi:PG2097 1.7e-136 prsA; ribose-phosphate pyrophosphokinase K00948.
  
  
 0.787
EEC96190.1
Tetrapyrrole methylase; KEGG: eci:UTI89_C3573 8.2e-18 yraL; hypothetical protein.
       0.785
EEC95389.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 6.8e-78 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.773
EEC97787.1
Oxidoreductase, NAD-binding domain protein; KEGG: bxe:Bxe_A1332 6.4e-20 putative oxidoreductase K00010; Psort location: Periplasmic, score: 9.44.
 
     0.704
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
 
 0.659
rfbB
KEGG: bfs:BF3504 1.3e-175 rffG; putative dTDP-glucose 4,6-dehydratase K01710; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
    
 0.648
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
  
 0.618
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.592
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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