Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEC96160.1Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00. (769 aa)    
Predicted Functional Partners:
EEC97582.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: fal:FRAAL6466 6.4e-50 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; Psort location: CytoplasmicMembrane, score: 7.88.
 
   0.830
EEC94393.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: cch:Cag_0337 4.4e-51 ATPase K06020; Psort location: CytoplasmicMembrane, score: 7.88.
 
   0.830
EEC98575.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: fal:FRAAL6466 1.0e-51 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; Psort location: CytoplasmicMembrane, score: 7.88.
 
   0.824
EEC97346.1
Efflux transporter, RND family, MFP subunit.
 
   0.823
EEC94385.1
Efflux transporter, RND family, MFP subunit; KEGG: dme:Dmel_CG14217 0.0088 Tao-1 K04429; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.823
EEC95707.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0988 3.4e-51 ATPase K02003; Psort location: CytoplasmicMembrane, score: 7.88.
 
   0.806
EEC95650.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: fal:FRAAL6466 4.7e-54 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; Psort location: CytoplasmicMembrane, score: 7.88.
 
   0.799
EEC95660.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: chu:CHU_2197 9.0e-23 atoS; two-component sensor histidine kinase (sensor protein AtoS); Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.772
EEC96692.1
Efflux transporter, RND family, MFP subunit; KEGG: mmo:MMOB2680 0.0060 lonA; ATP-dependent Lon protease K01338; Psort location: CytoplasmicMembrane, score: 8.02.
  
   0.761
EEC97357.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ccr:CC1742 2.0e-26 ntrY; nitrogen regulation protein NtrY; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.756
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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