STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppk1Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (689 aa)    
Predicted Functional Partners:
EEC96162.1
Hypothetical protein.
       0.773
EEC96164.1
Phosphodiesterase family protein; KEGG: sru:SRU_1938 1.0e-28 phosphoesterase, putative subfamily; Psort location: Cytoplasmic, score: 8.96.
     
 0.610
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.554
EEC98539.1
CBS domain protein; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.493
EEC96161.1
Hypothetical protein.
       0.450
EEC96499.1
Hypothetical protein.
    
  0.422
pstC
Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
 0.422
EEC95336.1
HAD hydrolase, family IA, variant 1; KEGG: smu:SMU.1254 3.1e-57 conserved hypothetical protein K01091; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.417
EEC95033.1
HAD hydrolase, family IA, variant 3; KEGG: dvu:DVU0130 4.2e-14 phosphoglycolate phosphatase, putative K01091.
  
 
  0.417
EEC96160.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.405
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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