STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96165.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (385 aa)    
Predicted Functional Partners:
EEC94627.1
BNR/Asp-box repeat protein.
  
     0.773
EEC97454.1
Hypothetical protein; KEGG: sce:YLR286C 9.4e-06 CTS1; Endochitinase K01183; Psort location: OuterMembrane, score: 9.49.
  
     0.770
EEC96223.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.770
EEC95303.1
Hypothetical protein.
  
     0.769
EEC96756.1
Hypothetical protein.
  
     0.768
EEC94686.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.767
EEC95602.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.763
EEC98392.1
Hypothetical protein.
  
     0.762
EEC97589.1
Hypothetical protein.
  
     0.761
EEC95664.1
Hypothetical protein.
  
     0.760
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.