STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96167.1Peptidase, S9A/B/C family, catalytic domain protein; KEGG: pgi:PG0503 3.8e-251 dpp; dipeptidyl aminopeptidase IV K01278. (724 aa)    
Predicted Functional Partners:
EEC96677.1
Putative inosine-5'-monophosphate dehydrogenase; KEGG: bfs:BF3343 2.1e-232 impDH; inositol-5-monophosphate dehydrogenase K00088.
  
 
  0.592
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.592
EEC95255.1
KEGG: zmo:ZMO1604 4.9e-59 phosphodiesterase-nucleotide pyrophosphatase.
  
     0.571
EEC96517.1
Peptidase, M28 family; KEGG: rba:RB4928 3.8e-29 probable aminopeptidase K01269; Psort location: Extracellular, score: 9.71.
  
    0.568
EEC96169.1
Radical SAM protein, TIGR01212 family; KEGG: spz:M5005_Spy_0315 4.4e-51 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
       0.561
EEC96168.1
Hypothetical protein.
       0.549
lipA
Putative lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.515
EEC96165.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.458
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.448
EEC94224.1
WD40-like protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.428
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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