STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96158.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (299 aa)    
Predicted Functional Partners:
EEC98375.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: cno:NT01CX_2157 9.6e-11 N-acetylmuramoyl-L-alanine amidase CwlL precursor (cellwall hydrolase) (autolysin) K01446.
  
  
 0.799
EEC97039.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: ppu:PP_4382 1.7e-13 flgJ; peptidoglycan hydrolase FlgJ K02395; ORF located using Blastx.
  
  
 0.799
EEC96131.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: xcb:XC_2242 4.0e-12 flagellar protein K02395.
  
  
 0.799
EEC98323.1
Hypothetical protein; KEGG: pgi:PG0506 0.0089 prtRII; arginine-specific cysteine proteinase K08589.
 
  
 0.733
EEC96458.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rba:RB10330 2.2e-56 sensory transduction histidine kinase-possibly sensor/response regulator hybrid; Psort location: CytoplasmicMembrane, score: 7.88.
  
    0.730
EEC96532.1
Hypothetical protein.
  
     0.625
EEC98455.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.622
EEC94381.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.617
EEC94378.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.590
EEC95470.1
Stage II sporulation protein E; KEGG: ava:Ava_0278 2.0e-30 serine phosphatase K07315.
 
    0.566
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.