STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96107.1Hypothetical protein; KEGG: bth:BT3848 2.2e-63 peptidyl-prolyl cis-trans isomerase K03771; Psort location: Cytoplasmic, score: 8.96. (196 aa)    
Predicted Functional Partners:
EEC96108.1
PPIC-type PPIASE domain protein; KEGG: bth:BT3848 3.0e-75 peptidyl-prolyl cis-trans isomerase K03771.
     0.994
EEC96106.1
Hypothetical protein.
 
   
 0.942
yaeT
Outer membrane protein assembly complex, YaeT protein; Psort location: OuterMembrane, score: 10.00.
  
 
 0.811
EEC94612.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
 
  
 0.795
yfiO
Outer membrane assembly lipoprotein YfiO.
  
  
 0.787
EEC97876.1
Hypothetical protein; KEGG: tdn:Tmden_1650 0.00081 aspartate kinase, monofunctional class K00928; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.766
EEC98158.1
Hypothetical protein.
  
    0.765
mutL
DNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
 
 
 
 0.763
EEC95607.1
Outer membrane protein, OMP85 family.
  
 
 0.759
EEC98401.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.758
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.