STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96110.1PPIC-type PPIASE domain protein; KEGG: chu:CHU_0192 5.2e-72 possible peptidyl-prolyl cis-trans isomerase K01802; Psort location: Periplasmic, score: 9.44. (532 aa)    
Predicted Functional Partners:
EEC96109.1
Hypothetical protein.
 
     0.812
EEC96108.1
PPIC-type PPIASE domain protein; KEGG: bth:BT3848 3.0e-75 peptidyl-prolyl cis-trans isomerase K03771.
 
     0.774
EEC96106.1
Hypothetical protein.
 
   
 0.758
EEC96107.1
Hypothetical protein; KEGG: bth:BT3848 2.2e-63 peptidyl-prolyl cis-trans isomerase K03771; Psort location: Cytoplasmic, score: 8.96.
 
     0.737
EEC98323.1
Hypothetical protein; KEGG: pgi:PG0506 0.0089 prtRII; arginine-specific cysteine proteinase K08589.
  
   
 0.706
EEC97967.1
Two component regulator propeller; KEGG: pfa:PF13_0044 0.00073 carbamoyl phosphate synthetase, putative K01955:K01956; Psort location: OuterMembrane, score: 9.49.
  
     0.692
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
   0.691
mutL
DNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
   
 
 0.674
EEC96105.1
Hypothetical protein.
       0.642
EEC94653.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
 
     0.626
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.