STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95926.1tRNA ligases class II (D, K and N); KEGG: bth:BT2122 5.8e-88 lysyl-tRNA synthetase K04567; Psort location: Cytoplasmic, score: 10.00. (208 aa)    
Predicted Functional Partners:
EEC95950.1
Putative lysine--tRNA ligase; KEGG: bth:BT2122 5.4e-172 lysyl-tRNA synthetase K04567; Psort location: Cytoplasmic, score: 10.00.
     0.985
gltX
glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
 
 0.882
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
 0.868
pgi
KEGG: bfr:BF3812 1.3e-179 glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.26; Belongs to the GPI family.
  
  
 0.851
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.846
guaA-2
GMP synthase (glutamine-hydrolyzing) domain protein; KEGG: bth:BT2419 5.5e-218 putative GMP synthase [glutamine-hydrolyzing] K01951; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.846
glnS
glutamine--tRNA ligase; KEGG: bth:BT1325 3.9e-281 glutaminyl-tRNA synthetase K01886; Psort location: Cytoplasmic, score: 8.96.
 
 0.844
argS
arginine--tRNA ligase; KEGG: bth:BT2829 1.0e-257 arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 9.97.
  
 0.827
proS
proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
  
 0.806
prs
KEGG: pgi:PG2097 1.7e-136 prsA; ribose-phosphate pyrophosphokinase K00948.
  
 
 0.805
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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