STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95564.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
EEC95565.1
3'-5' exonuclease; KEGG: msu:MS1357 9.0e-08 rnd; ribonuclease D K03684.
       0.793
EEC95566.1
KEGG: chu:CHU_3712 9.5e-88 hypothetical protein K00599.
       0.793
EEC95563.1
Hypothetical protein.
       0.773
EEC95664.1
Hypothetical protein.
  
     0.763
EEC97694.1
Hypothetical protein; KEGG: ljo:LJ1840 3.7e-06 cell wall-associated serine proteinase K01361.
  
     0.759
EEC95903.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.755
EEC94132.1
Universal stress family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.753
EEC97619.1
Tetratricopeptide repeat domain protein.
  
     0.752
EEC95888.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 1.1e-06 serine/threonine protein kinase with TPR repeats K00908.
  
     0.752
EEC98353.1
Hypothetical protein.
  
     0.745
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.