STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95530.1Glycosyltransferase, group 2 family protein; KEGG: chu:CHU_2182 7.5e-07 ycdQ; b-glycosyltransferase-related protein, glycosyltransferase family 2 protein K00754; Psort location: CytoplasmicMembrane, score: 9.46. (428 aa)    
Predicted Functional Partners:
EEC97875.1
KEGG: ava:Ava_1295 8.1e-27 polysaccharide deacetylase K01452; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.836
EEC98189.1
Hypothetical protein; KEGG: bcz:BCZK1776 0.0070 mdmC; O-methyltransferase K00599.
 
     0.757
EEC97189.1
Kinase domain protein; KEGG: ava:Ava_A0032 4.2e-49 serine/threonine protein kinase with TPR repeats K00908; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.676
EEC95559.1
Outer membrane lipoprotein carrier protein LolA.
  
     0.650
EEC95331.1
Peptidase family M49; KEGG: bfs:BF3247 1.6e-257 putative membrane attached peptidase K01277.
 
   0.642
EEC94881.1
Glycosyltransferase, group 1 family protein; KEGG: azo:azo2324 5.9e-12 putative polysaccharide deacetylase.
  
 
 0.638
EEC98208.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 9.6e-05 serine/threonine protein kinase with TPR repeats K00908.
 
 
 0.607
EEC97649.1
Hypothetical protein.
  
 
 0.604
EEC95986.1
Two component regulator propeller; KEGG: shn:Shewana3_3829 3.3e-18 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745.
 
 
 0.573
EEC95257.1
Tetratricopeptide repeat protein; KEGG: mja:MJ1519 3.9e-10 recD; exodeoxyribonuclease V K03581; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.566
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.