STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95536.16-O-methylguanine DNA methyltransferase, DNA binding domain protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (177 aa)    
Predicted Functional Partners:
EEC95537.1
Transporter, major facilitator family protein; KEGG: gme:Gmet_0086 6.7e-05 2-acyl-glycerophospho-ethanolamine acyltransferase K05939:K01909; Psort location: CytoplasmicMembrane, score: 10.00.
       0.781
EEC95538.1
ABC transporter, ATP-binding protein; KEGG: ava:Ava_3020 4.0e-128 ABC transporter-like K06020; Psort location: Cytoplasmic, score: 9.12.
       0.781
EEC95535.1
Hypothetical protein.
       0.618
EEC98509.1
Sigma-70 region 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
 
 0.617
EEC98394.1
KEGG: bfs:BF0699 3.9e-50 putative lipid-A-disaccharide synthase K00748; Belongs to the LpxB family.
      0.616
EEC98393.1
Hypothetical protein; KEGG: bth:BT4004 3.0e-43 lipid-A-disaccharide synthase K00748; Belongs to the LpxB family.
      0.591
EEC97874.1
Putative iron-sulfur cluster-binding protein; KEGG: mba:Mbar_A2173 0.0042 hypothetical protein K00188; Psort location: Cytoplasmic, score: 8.96.
      0.589
EEC95539.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.542
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
 
 
 0.528
EEC96307.1
Universal stress family protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.445
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.