STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95411.1Polysaccharide biosynthesis/export protein. (273 aa)    
Predicted Functional Partners:
EEC95412.1
Chain length determinant protein; KEGG: pgi:PG0436 4.8e-23 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.997
EEC95401.1
Capsular exopolysaccharide family; KEGG: pgi:PG0436 3.4e-99 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.995
EEC97040.1
Chain length determinant protein; KEGG: pgi:PG0436 1.3e-58 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.992
EEC94204.1
Chain length determinant protein; KEGG: pgi:PG0436 5.6e-34 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.992
EEC97049.1
Capsular exopolysaccharide family; KEGG: pgi:PG0436 4.9e-107 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.990
EEC97628.1
KEGG: tcx:Tcr_1675 6.6e-64 undecaprenyl-phosphate galactosephosphotransferase K03606; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.912
EEC95410.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.716
EEC95402.1
Hypothetical protein; KEGG: cno:NT01CX_1524 7.7e-22 CpsB protein K01104.
 
     0.673
EEC96324.1
Hypothetical protein; KEGG: ava:Ava_0852 4.8e-15 lipopolysaccharide biosynthesis K00903.
  
 0.577
EEC97028.1
Hypothetical protein; KEGG: gbe:GbCGDNIH1_1752 2.3e-08 alpha-L-glycero-D-manno-heptose alpha-1,3-glucosyltransferase K00754.
 
 
 0.542
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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