STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95412.1Chain length determinant protein; KEGG: pgi:PG0436 4.8e-23 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82. (264 aa)    
Predicted Functional Partners:
EEC95411.1
Polysaccharide biosynthesis/export protein.
 
 0.997
EEC97041.1
Polysaccharide biosynthesis/export protein.
 
 0.992
EEC94205.1
Polysaccharide biosynthesis/export protein.
 
 0.990
EEC97628.1
KEGG: tcx:Tcr_1675 6.6e-64 undecaprenyl-phosphate galactosephosphotransferase K03606; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.989
EEC95837.1
Polysaccharide biosynthesis/export protein; Psort location: Periplasmic, score: 9.44.
  
 0.970
EEC95800.1
Hypothetical protein.
  
 0.970
EEC95401.1
Capsular exopolysaccharide family; KEGG: pgi:PG0436 3.4e-99 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.955
EEC97049.1
Capsular exopolysaccharide family; KEGG: pgi:PG0436 4.9e-107 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.897
EEC97028.1
Hypothetical protein; KEGG: gbe:GbCGDNIH1_1752 2.3e-08 alpha-L-glycero-D-manno-heptose alpha-1,3-glucosyltransferase K00754.
 
 
 0.842
EEC95357.1
Cupin domain protein; KEGG: btl:BALH_4770 5.7e-21 manA, manC; mannose-1-phosphate guanylyl transferase K01809; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.802
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.