STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95404.1Nucleotide sugar dehydrogenase; KEGG: bth:BT0599 1.4e-95 UDP-glucose 6-dehydrogenase K00012. (234 aa)    
Predicted Functional Partners:
EEC95375.1
Nucleotide sugar dehydrogenase; KEGG: bth:BT0379 2.1e-83 UDP-glucose 6-dehydrogenase K00012.
     0.986
EEC95389.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 6.8e-78 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; Psort location: Cytoplasmic, score: 8.96.
  
 0.928
rfbB
KEGG: bfs:BF3504 1.3e-175 rffG; putative dTDP-glucose 4,6-dehydratase K01710; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.820
EEC95357.1
Cupin domain protein; KEGG: btl:BALH_4770 5.7e-21 manA, manC; mannose-1-phosphate guanylyl transferase K01809; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.806
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.736
EEC97275.1
Hypothetical protein; KEGG: nma:NMA0848 0.00025 galU; putative UTP--glucose-1-phosphate uridylyltransferase K00963.
  
 
 0.732
EEC97628.1
KEGG: tcx:Tcr_1675 6.6e-64 undecaprenyl-phosphate galactosephosphotransferase K03606; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.675
EEC95403.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.675
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.663
EEC96309.1
NAD dependent epimerase/dehydratase family protein; KEGG: bth:BT1059 2.1e-122 putative UDP-glucose 4-epimerase K01710; Psort location: Cytoplasmic, score: 8.96.
  
 0.630
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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