STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95378.1Glycosyltransferase, group 1 family protein; KEGG: lsl:LSL_1556 8.1e-43 rfaG; glycosyltransferase K00754. (403 aa)    
Predicted Functional Partners:
EEC95376.1
Glycosyltransferase, group 1 family protein; KEGG: ava:Ava_1041 5.9e-22 glycosyl transferase, group 1 K00703.
 
     0.848
EEC95379.1
Hypothetical protein; KEGG: efa:EF2489 6.8e-18 MurB family protein K00075.
  
    0.779
EEC95377.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EEC95993.1
Alpha amylase, catalytic domain protein; KEGG: bth:BT0771 1.3e-305 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) K00700.
  
 0.720
EEC95375.1
Nucleotide sugar dehydrogenase; KEGG: bth:BT0379 2.1e-83 UDP-glucose 6-dehydrogenase K00012.
  
  
 0.656
EEC95833.1
Glycosyltransferase, group 1 family protein; KEGG: sat:SYN_00818 4.6e-11 lipopolysaccharide 1,2-N-acetylglucosaminetransferase.
  
     0.621
EEC97364.1
Hypothetical protein; KEGG: eci:UTI89_C1599 1.4e-36 hypothetical protein YcjY.
   
 
 0.620
EEC94144.1
Glycosyltransferase, group 1 family protein; KEGG: lsl:LSL_1559 4.2e-30 rfaG; glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
  
     0.619
EEC95357.1
Cupin domain protein; KEGG: btl:BALH_4770 5.7e-21 manA, manC; mannose-1-phosphate guanylyl transferase K01809; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.610
EEC96321.1
KEGG: chu:CHU_0928 1.4e-36 rfaG; A-glycosyltransferase, glycosyltransferase family 4 protein K00754; Psort location: Cytoplasmic, score: 8.96.
  
     0.588
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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