STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95359.1Sigma-54 interaction domain protein; KEGG: eci:UTI89_C2502 1.4e-68 atoC; acetoacetate metabolism regulatory protein AtoC K07714; Psort location: Cytoplasmic, score: 9.97. (433 aa)    
Predicted Functional Partners:
EEC96458.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rba:RB10330 2.2e-56 sensory transduction histidine kinase-possibly sensor/response regulator hybrid; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.887
EEC95468.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: chu:CHU_2796 2.6e-31 pgtB; phosphoglycerate transport; protein for signal transmission; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.878
EEC95892.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ana:all4963 1.2e-53 cyaC; adenylate cyclase carring two-component hybrid sensor and regulator domains; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.840
rpoN
RNA polymerase sigma-54 factor; KEGG: reh:H16_A0387 2.4e-73 rpoN; DNA-directed RNA polymerase sigma subunit (RpoN) K00960; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.835
EEC95358.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ecc:c2761 1.8e-42 rcsC; sensor protein RcsC K07677; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.810
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
 0.802
EEC96933.1
PAS domain S-box protein; KEGG: mma:MM2629 4.3e-15 hypothetical sensory transduction histidine kinase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.744
EEC95470.1
Stage II sporulation protein E; KEGG: ava:Ava_0278 2.0e-30 serine phosphatase K07315.
 
 
 0.708
EEC97522.1
Response regulator receiver domain protein; KEGG: ana:all4963 6.0e-44 cyaC; adenylate cyclase carring two-component hybrid sensor and regulator domains.
  
 0.690
EEC96515.1
Response regulator receiver domain protein; KEGG: ava:Ava_2239 5.6e-43 adenylate/guanylate cyclase K01768.
  
 0.690
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.