STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95348.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
EEC96516.1
Hypothetical protein.
  
     0.629
EEC95860.1
Hypothetical protein.
  
     0.624
EEC94627.1
BNR/Asp-box repeat protein.
  
    0.597
EEC95502.1
Hypothetical protein; KEGG: ava:Ava_5054 8.9e-20 serine/threonine protein kinase K00908; Psort location: CytoplasmicMembrane, score: 8.02.
  
 
 0.595
EEC97589.1
Hypothetical protein.
  
    0.580
hup-8
DNA-binding protein HU; KEGG: noc:Noc_1406 7.1e-05 cation transport ATPase K01537; Psort location: Cytoplasmic, score: 8.96; Belongs to the bacterial histone-like protein family.
  
    0.568
EEC96635.1
Hypothetical protein.
  
     0.563
EEC95591.1
Hypothetical protein.
  
     0.563
EEC95602.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.559
EEC95136.1
Tetratricopeptide repeat protein.
  
    0.554
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.