STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95225.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (149 aa)    
Predicted Functional Partners:
EEC95226.1
Hypothetical protein.
 
     0.946
EEC95426.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.752
EEC95368.1
Hypothetical protein.
 
     0.748
EEC95421.1
Hypothetical protein.
  
     0.747
EEC95157.1
Ribbon-helix-helix protein, CopG family; KEGG: cte:CT0095 0.0012 lysC; aspartokinase K00928; Psort location: Cytoplasmic, score: 8.96.
  
     0.740
EEC95365.1
Hypothetical protein.
  
     0.738
EEC95423.1
Hypothetical protein; KEGG: ath:At4g38890 0.00072 T9A14.170; dihydrouridine synthase family protein K05544; Psort location: Periplasmic, score: 9.51.
  
     0.733
EEC94077.1
Hypothetical protein; KEGG: bth:BT0105 8.0e-33 DNA topoisomerase I (Omega-protein) K03169.
  
     0.728
EEC95192.1
Hypothetical protein.
  
     0.722
EEC94069.1
Hypothetical protein; KEGG: bcz:BCZK2108 0.00075 pbp1A; penicillin-binding protein 1A K05366; Psort location: Cytoplasmic, score: 8.96.
  
     0.716
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.