STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95201.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
EEC95202.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.786
EEC95200.1
META domain protein.
       0.773
EEC95199.1
Hydrolase, alpha/beta domain protein; KEGG: gox:GOX0738 2.8e-05 non-heme chloroperoxidase K00433.
       0.770
EEC95197.1
Sigma-54 interaction domain protein; KEGG: eci:UTI89_C2502 2.0e-64 atoC; acetoacetate metabolism regulatory protein AtoC K07714; Psort location: Cytoplasmic, score: 9.97.
       0.757
EEC95198.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: vfi:VFA0072 1.0e-40 luxQ; sensor protein LuxQ; Psort location: CytoplasmicMembrane, score: 7.88.
       0.757
EEC95203.1
MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.588
EEC95196.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.405
EEC95204.1
Peptidase, M56 family; Psort location: CytoplasmicMembrane, score: 9.46.
       0.403
EEC95205.1
Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 5.3e-07 blaI; beta-lactamase (penicillinase) repressor K01467.
       0.403
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.