STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95206.1Glyoxalase family protein; KEGG: hma:rrnAC2504 0.0078 lgl; putative lactoyglutathione lyase K01759. (121 aa)    
Predicted Functional Partners:
EEC97441.1
Putative 3-deoxy-7-phosphoheptulonate synthase; KEGG: bth:BT3934 5.6e-154 phospho-2-dehydro-3-deoxyheptonate aldolase / chorismate mutase K04516:K03856; Psort location: Cytoplasmic, score: 8.96.
    
  0.770
EEC95210.1
KEGG: tdn:Tmden_1946 0.0011 transcriptional regulator, AraC family K00567.
 
     0.633
EEC95207.1
4Fe-4S binding domain protein; KEGG: mth:MTH1553 3.0e-07 tungsten formylmethanofuran dehydrogenase, subunit H K00204.
  
    0.585
EEC95209.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.546
EEC95208.1
Hypothetical protein.
       0.542
EEC98075.1
Glyoxalase family protein.
    
  0.534
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
   
 
  0.525
EEC96939.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.496
EEC94450.1
Glyoxalase family protein; KEGG: bfr:BF2387 5.9e-40 hypothetical protein K01759.
 
 
 0.484
EEC95811.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: btl:BALH_0703 3.2e-135 ndh; NADH dehydrogenase K00356; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.477
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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