STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95209.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (199 aa)    
Predicted Functional Partners:
EEC95207.1
4Fe-4S binding domain protein; KEGG: mth:MTH1553 3.0e-07 tungsten formylmethanofuran dehydrogenase, subunit H K00204.
 
    0.854
EEC95208.1
Hypothetical protein.
       0.791
EEC97141.1
Transcriptional regulator, AraC family; KEGG: bha:BH0394 1.7e-09 adaA; methylphosphotriester-DNA alkyltransferase (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 8.96.
  
     0.594
EEC97796.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.579
EEC95210.1
KEGG: tdn:Tmden_1946 0.0011 transcriptional regulator, AraC family K00567.
       0.553
EEC95206.1
Glyoxalase family protein; KEGG: hma:rrnAC2504 0.0078 lgl; putative lactoyglutathione lyase K01759.
  
    0.546
EEC97079.1
Urea transporter; KEGG: lpf:lpl0907 0.0021 pntB; NAD(P) transhydrogenase subunit beta (Pyridine nucleotide transhydrogenase subunit beta) K00325; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.495
EEC95211.1
KEGG: rle:RL1014 3.1e-06 pdxH; putative pyridoxamine 5'-phosphate oxidase K00275.
  
    0.438
EEC95212.1
Pyridoxamine 5'-phosphate oxidase family protein.
  
    0.432
EEC96689.1
PAS domain S-box protein; KEGG: bth:BT2420 8.1e-84 frrD; two-component system histidine kinase, FrrD K02484.
  
   
 0.424
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.