STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95212.1Pyridoxamine 5'-phosphate oxidase family protein. (226 aa)    
Predicted Functional Partners:
EEC95211.1
KEGG: rle:RL1014 3.1e-06 pdxH; putative pyridoxamine 5'-phosphate oxidase K00275.
 
    
0.812
EEC95210.1
KEGG: tdn:Tmden_1946 0.0011 transcriptional regulator, AraC family K00567.
  
    0.628
EEC96618.1
Lincosamide resistance family protein; KEGG: ana:alr7069 0.00089 aminoglycoside adenylyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.574
EEC95214.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.543
EEC95215.1
Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 2.8e-08 blaI; beta-lactamase (penicillinase) repressor K01467; Psort location: Cytoplasmic, score: 8.96.
 
    0.531
EEC95213.1
Hypothetical protein; KEGG: sus:Acid_2285 8.9e-21 beta-lactamase K01467.
       0.477
EEC95202.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.443
EEC94795.1
Hypothetical protein; KEGG: vfi:VFA0728 1.1e-06 acetyltransferase K00680.
   
    0.442
EEC95207.1
4Fe-4S binding domain protein; KEGG: mth:MTH1553 3.0e-07 tungsten formylmethanofuran dehydrogenase, subunit H K00204.
       0.441
EEC96885.1
Hypothetical protein.
   
    0.438
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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