STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95213.1Hypothetical protein; KEGG: sus:Acid_2285 8.9e-21 beta-lactamase K01467. (249 aa)    
Predicted Functional Partners:
EEC95214.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EEC95215.1
Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 2.8e-08 blaI; beta-lactamase (penicillinase) repressor K01467; Psort location: Cytoplasmic, score: 8.96.
     
 0.754
EEC95212.1
Pyridoxamine 5'-phosphate oxidase family protein.
       0.477
EEC95211.1
KEGG: rle:RL1014 3.1e-06 pdxH; putative pyridoxamine 5'-phosphate oxidase K00275.
       0.471
EEC95216.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.440
EEC95447.1
Beta-lactamase; KEGG: chu:CHU_0013 4.5e-184 nagA; b-glycosidase, glycoside hydrolase family 3 protein K01188; Psort location: Cytoplasmic, score: 9.26.
    
 0.423
EEC95335.1
Beta-lactamase; KEGG: chu:CHU_3232 6.4e-66 ampC; probable beta-lactamase K01467.
    
 0.408
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.