STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95193.1N-6 DNA Methylase; KEGG: bfs:BF1838 1.6e-05 hsdM; putative type I restriction enzyme methylase K03427. (840 aa)    
Predicted Functional Partners:
EEC95194.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.952
EEC94110.1
Helicase C-terminal domain protein.
     0.906
EEC94975.1
Helicase C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.
     0.905
EEC96812.1
Hypothetical protein; KEGG: pmn:PMN2A_1332 0.0052 DNA gyrase/topoisomerase IV, subunit A K02469; Psort location: Cytoplasmic, score: 8.96.
     0.829
EEC95426.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.800
EEC96817.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.796
EEC96826.1
Hypothetical protein.
 
    0.760
EEC94069.1
Hypothetical protein; KEGG: bcz:BCZK2108 0.00075 pbp1A; penicillin-binding protein 1A K05366; Psort location: Cytoplasmic, score: 8.96.
 
     0.757
EEC95423.1
Hypothetical protein; KEGG: ath:At4g38890 0.00072 T9A14.170; dihydrouridine synthase family protein K05544; Psort location: Periplasmic, score: 9.51.
 
     0.745
EEC95235.1
Hypothetical protein.
  
     0.745
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.