Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEC95192.1Hypothetical protein. (300 aa)    
Predicted Functional Partners:
EEC94069.1
Hypothetical protein; KEGG: bcz:BCZK2108 0.00075 pbp1A; penicillin-binding protein 1A K05366; Psort location: Cytoplasmic, score: 8.96.
 
     0.904
EEC94077.1
Hypothetical protein; KEGG: bth:BT0105 8.0e-33 DNA topoisomerase I (Omega-protein) K03169.
 
 
   0.802
EEC96825.1
DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 8.96.
 
     0.781
EEC96812.1
Hypothetical protein; KEGG: pmn:PMN2A_1332 0.0052 DNA gyrase/topoisomerase IV, subunit A K02469; Psort location: Cytoplasmic, score: 8.96.
 
     0.781
EEC96817.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.778
EEC95194.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.778
EEC95426.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.775
EEC96977.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.774
EEC96826.1
Hypothetical protein.
  
     0.774
EEC95235.1
Hypothetical protein.
  
     0.774
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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