STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95189.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (337 aa)    
Predicted Functional Partners:
EEC96292.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: eci:UTI89_C0501 3.0e-68 htpG; chaperone HSP90, heat shock protein C 62.5 K04079; Psort location: Cytoplasmic, score: 9.26.
   
 0.798
EEC96766.1
Hypothetical protein; KEGG: ecu:ECU07_0360 3.7e-15 07_0360, SER/THR/TYR PROTEIN KINASE, IPL1_yeast, gene found by Glimmer K00870; Psort location: Cytoplasmic, score: 8.96.
   
 0.796
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.777
EEC95495.1
Ankyrin repeat protein; KEGG: hsa:8658 3.8e-33 TNKS; tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase K00774; Psort location: Cytoplasmic, score: 8.96.
   
 0.777
EEC98087.1
Tetratricopeptide repeat protein; KEGG: rno:26295 2.6e-10 Ogt; O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) K00754.
  
 0.741
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.732
EEC95468.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: chu:CHU_2796 2.6e-31 pgtB; phosphoglycerate transport; protein for signal transmission; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.702
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.697
EEC97325.1
Threonine/alanine tRNA ligase second additional domain protein; KEGG: sru:SRU_1141 9.5e-17 alanyl-tRNA synthetase K01872; Psort location: Cytoplasmic, score: 8.96.
   
 0.697
EEC94751.1
GMC oxidoreductase; KEGG: azo:azo1228 7.8e-61 gdhAlpha1; putative glucose dehydrogenase alpha subunit K00120.
    
 0.689
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.