STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95171.1Septum formation initiator. (101 aa)    
Predicted Functional Partners:
EEC98357.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 
 0.987
EEC95172.1
Hypothetical protein; KEGG: eba:ebA2757 0.0061 bclA; benzoate-CoA ligase K04110; Psort location: CytoplasmicMembrane, score: 9.46.
       0.793
EEC98352.1
Hypothetical protein; KEGG: bfr:BF0311 2.9e-14 penicillin-binding protein K03587.
 
 
 0.677
dnaX
DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
    0.600
EEC94258.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.588
EEC95480.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.501
EEC96057.1
Sensor histidine kinase.
  
     0.496
EEC95163.1
Hypothetical protein.
  
     0.482
porT
PorT protein.
  
     0.470
EEC94646.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.467
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.