STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95118.1Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; KEGG: bth:BT1548 1.6e-220 phosphoglucomutase phosphomannomutase K01840. (582 aa)    
Predicted Functional Partners:
pgi
KEGG: bfr:BF3812 1.3e-179 glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.26; Belongs to the GPI family.
 
 
 0.910
prs
KEGG: pgi:PG2097 1.7e-136 prsA; ribose-phosphate pyrophosphokinase K00948.
 
 0.834
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
  
 
 0.825
EEC95357.1
Cupin domain protein; KEGG: btl:BALH_4770 5.7e-21 manA, manC; mannose-1-phosphate guanylyl transferase K01809; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.810
EEC97417.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: bfr:BF1652 2.6e-298 transketolase K00615; Belongs to the transketolase family.
  
 0.797
glgP
KEGG: bth:BT1293 0. alpha-glucan phosphorylase K00688; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.795
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.789
rpiA
KEGG: bfs:BF3474 5.5e-76 putative ribose 5-phosphate isomerase K01807; Psort location: Cytoplasmic, score: 8.96.
    
 0.775
EEC94741.1
KEGG: bfr:BF3828 2.1e-248 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.774
rpiB
KEGG: bfr:BF1651 5.9e-56 ribose 5-phosphate isomerase B K01808; Psort location: Cytoplasmic, score: 8.96.
     
 0.769
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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