STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95120.1TonB-linked outer membrane protein, SusC/RagA family; Psort location: OuterMembrane, score: 9.49. (796 aa)    
Predicted Functional Partners:
EEC95119.1
TonB-dependent receptor plug domain protein.
     0.930
EEC95121.1
Hypothetical protein.
 
     0.926
EEC95122.1
SusD family protein.
 
     0.926
EEC96654.1
SusD family protein.
  
     0.774
EEC96658.1
SusD family protein.
  
     0.774
EEC97919.1
SusD family protein.
  
     0.763
EEC96680.1
Tetratricopeptide repeat protein.
  
     0.762
EEC96124.1
SusD family protein.
  
     0.756
EEC98116.1
SusD family protein.
  
     0.746
EEC94568.1
SusD family protein.
  
     0.742
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.