STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95132.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (185 aa)    
Predicted Functional Partners:
miaA-2
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.793
EEC97563.1
Hypothetical protein.
  
     0.750
EEC97936.1
Hypothetical protein.
  
     0.747
EEC94685.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 1.7e-11 serine/threonine protein kinase with TPR repeats K00908; Psort location: OuterMembrane, score: 9.49.
  
     0.739
EEC95564.1
Hypothetical protein.
  
     0.728
EEC94258.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.726
EEC95664.1
Hypothetical protein.
  
     0.718
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
       0.713
EEC98545.1
TonB family domain protein; KEGG: bar:GBAA2345 1.3e-09 penicillin-binding protein 1A K05366; Psort location: CytoplasmicMembrane, score: 8.02.
  
     0.712
EEC94132.1
Universal stress family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.703
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.