STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95139.1KEGG: pgi:PG1371 2.4e-107 phosphorylase family protein K00757; Psort location: Cytoplasmic, score: 8.96. (287 aa)    
Predicted Functional Partners:
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
 0.930
EEC97506.1
KEGG: bth:BT2791 1.2e-85 uracil phosphoribosyltransferase K00761.
  
  
 0.804
EEC98099.1
Phosphoribulokinase/uridine kinase family protein; KEGG: bfs:BF4152 5.8e-175 putative phosphoribulose/uridine kinase K01868; Psort location: Cytoplasmic, score: 8.96.
    
 0.787
EEC96017.1
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.786
surE
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.756
EEC98485.1
HAD hydrolase, TIGR02254 family; KEGG: bce:BC5408 3.8e-29 2-haloalkanoic acid dehalogenase K01560.
  
 
 0.646
EEC95138.1
Hypothetical protein.
       0.594
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
    
 0.585
EEC94232.1
DoxX family protein; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.559
rpiA
KEGG: bfs:BF3474 5.5e-76 putative ribose 5-phosphate isomerase K01807; Psort location: Cytoplasmic, score: 8.96.
       0.543
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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