STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95141.1Nitroreductase family protein; KEGG: bth:BT2144 6.9e-85 putative oxidoreductase; Belongs to the flavin oxidoreductase frp family. (247 aa)    
Predicted Functional Partners:
EEC95142.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.679
EEC98516.1
KEGG: cno:NT01CX_1801 2.2e-17 noxC; nitroreductase family protein.
  
  
  0.586
EEC95776.1
Endonuclease/exonuclease/phosphatase family protein; KEGG: bme:BMEII0240 4.7e-06 dioxygenase; Psort location: Cytoplasmic, score: 8.96.
    
  0.555
EEC95143.1
4Fe-4S binding domain protein; KEGG: mka:MK0323 7.8e-07 fwd_F2; probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing K00199; Psort location: Cytoplasmic, score: 8.96.
 
     0.551
ribF
KEGG: bth:BT2543 2.0e-85 ribF; riboflavin kinase / FMN adenylyltransferase K00861:K00953; Psort location: Cytoplasmic, score: 8.96; Belongs to the ribF family.
    
 0.550
trmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
    0.519
EEC95811.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: btl:BALH_0703 3.2e-135 ndh; NADH dehydrogenase K00356; Psort location: Cytoplasmic, score: 9.97.
    
 0.503
EEC95812.1
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
    
 0.503
EEC97262.1
Nitroreductase family protein; KEGG: fnu:FN1254 1.8e-22 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357; Psort location: Cytoplasmic, score: 8.96.
  
  
 
0.461
EEC97726.1
AMP-binding domain protein; KEGG: bfr:BF4466 6.8e-252 long-chain-fatty-acid-CoA ligase K01897; Psort location: Cytoplasmic, score: 9.26.
   
   0.440
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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