STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95148.1Hypothetical protein; KEGG: pmm:PMM1539 1.2e-06 adk; adenylate kinase K00939; Psort location: Cytoplasmic, score: 8.96. (173 aa)    
Predicted Functional Partners:
EEC95149.1
ASCH domain protein; KEGG: uur:UU132 8.7e-07 atpA-2; ATP synthase alpha chain K02111.
 
     0.932
EEC95150.1
Hypothetical protein.
 
     0.926
pyk
Pyruvate kinase; KEGG: bth:BT2841 2.0e-172 pyruvate kinase K00873; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.592
purB
Adenylosuccinate lyase; KEGG: bfs:BF3792 2.0e-181 purB; adenylosuccinate lyase K01756; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.540
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
   
    0.440
EEC95147.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.433
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
  
    0.412
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.