STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC95154.1Hypothetical protein. (455 aa)    
Predicted Functional Partners:
EEC95155.1
Hypothetical protein.
 
 0.935
EEC95153.1
DNA binding domain, excisionase family.
 
     0.934
EEC95157.1
Ribbon-helix-helix protein, CopG family; KEGG: cte:CT0095 0.0012 lysC; aspartokinase K00928; Psort location: Cytoplasmic, score: 8.96.
 
     0.800
EEC95145.1
DNA binding domain, excisionase family.
 
    0.736
EEC95158.1
Relaxase/mobilization nuclease domain protein.
 
     0.724
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
   
 
 0.706
EEC96532.1
Hypothetical protein.
  
 
 0.703
EEC94378.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.703
EEC94381.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.703
EEC94961.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.688
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.