STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC94891.1KEGG: lsa:LSA1190 1.1e-29 putative 4-carboxymuconolactone decarboxylase K01607. (260 aa)    
Predicted Functional Partners:
EEC94889.1
Antibiotic biosynthesis monooxygenase; KEGG: bur:Bcep18194_B2954 6.6e-48 amidohydrolase 2 K03392; Psort location: Cytoplasmic, score: 8.96.
 
  0.940
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
  0.850
EEC94892.1
Hypothetical protein.
 
     0.844
EEC94890.1
Hypothetical protein.
 
   
 0.823
purB
Adenylosuccinate lyase; KEGG: bfs:BF3792 2.0e-181 purB; adenylosuccinate lyase K01756; Psort location: Cytoplasmic, score: 8.96.
  
 0.823
EEC97124.1
Flavodoxin.
 
    0.757
EEC97142.1
KEGG: lpl:lp_2852 5.5e-28 4-carboxymuconolactone decarboxylase (putative) K01607.
 
  
0.612
EEC97123.1
Hypothetical protein.
 
  
0.609
EEC94888.1
Transcriptional regulator, AraC family; KEGG: bce:BC3740 7.4e-11 ADA regulatory protein K00567; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.609
EEC97135.1
KEGG: lsa:LSA1190 3.0e-29 putative 4-carboxymuconolactone decarboxylase K01607.
 
  
0.605
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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