STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC94203.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (218 aa)    
Predicted Functional Partners:
EEC94210.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
     0.992
EEC94204.1
Chain length determinant protein; KEGG: pgi:PG0436 5.6e-34 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.824
EEC94205.1
Polysaccharide biosynthesis/export protein.
  
  
 0.783
EEC94209.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: shn:Shewana3_2002 2.7e-17 peptidyl-dipeptidase A K01283.
  
  
 0.732
EEC94207.1
Glycosyltransferase, group 2 family protein; KEGG: fth:FTH_1386 8.1e-27 glycosyltransferase K00754.
  
    0.726
EEC94208.1
Glycosyltransferase, group 2 family protein; KEGG: bce:BC5267 2.1e-35 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
  
    0.726
EEC94206.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.716
EEC94218.1
Hypothetical protein.
  
  
 0.672
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
  0.610
EEC95389.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 6.8e-78 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.596
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.