STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC94149.1Glutamate-cysteine ligase; KEGG: dps:DP1233 3.3e-78 putative glutamate--cysteine ligase K01919; Belongs to the glutamate--cysteine ligase type 1 family. (423 aa)    
Predicted Functional Partners:
EEC97313.1
Hypothetical protein; KEGG: dps:DP1233 1.3e-99 putative glutamate--cysteine ligase K01919; Psort location: Cytoplasmic, score: 8.96.
  
 0.993
EEC96583.1
Glutamate synthase central domain protein; KEGG: bth:BT0553 0. glutamate synthase, large subunit K00265; Psort location: Cytoplasmic, score: 8.96.
     
 0.859
EEC96556.1
Class II glutamine amidotransferase; KEGG: bth:BT0553 8.3e-109 glutamate synthase, large subunit K00265; Psort location: Cytoplasmic, score: 8.96.
     
 0.859
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.853
glnA-2
Glutamate--ammonia ligase, catalytic domain protein; KEGG: bfr:BF2249 1.8e-226 glutamine synthetase I K01915; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.831
EEC97976.1
Glutamate decarboxylase; KEGG: bfs:BF0393 3.2e-229 gadB; putative glutamate decarboxylase K01580; Belongs to the group II decarboxylase family.
 
  
 0.802
purL
Putative phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.766
EEC97202.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: eca:ECA0118 1.5e-178 aldA, ald; aldehyde dehydrogenase A K07248:K00138; Psort location: Cytoplasmic, score: 9.26.
     
 0.762
pruA
KEGG: pgi:PG1269 7.9e-219 pruA; delta-1-pyrroline-5-carboxylate dehydrogenase K00294; Psort location: Cytoplasmic, score: 9.26.
     
 0.762
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
 
 0.762
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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