STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC94088.1KEGG: pgi:PG0425 2.7e-83 esterase, putative K03929. (273 aa)    
Predicted Functional Partners:
EEC94689.1
Hypothetical protein; KEGG: mba:Mbar_A1232 0.00029 glycosyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.594
EEC97198.1
Hydrogenase, Fe-only; KEGG: bth:BT0124 1.5e-206 NADH:ubiquinone oxidoreductase subunit K00336.
    
  0.559
pdxB-3
KEGG: bth:BT1575 4.1e-135 D-lactate dehydrogenase K03778; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.533
gpmA
Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
 0.533
EEC97923.1
Hypothetical protein; KEGG: eca:ECA2408 6.7e-39 paeX; pectin acetylesterase.
 
  
 0.517
EEC98548.1
Putative esterase; KEGG: bxe:Bxe_B2109 2.6e-21 putative esterase K01066.
 
  
 
0.498
EEC97380.1
Hypothetical protein; KEGG: eca:ECA2408 4.5e-14 paeX; pectin acetylesterase.
 
  
 0.488
EEC96041.1
Hydrolase, alpha/beta domain protein; KEGG: rba:RB3413 3.8e-22 probable lipase/esterase.
 
  
 0.484
EEC95266.1
Hypothetical protein; KEGG: eca:ECA2408 1.4e-45 paeX; pectin acetylesterase.
 
  
 0.481
EEC95259.1
GroES-like protein; KEGG: bth:BT4512 2.5e-174 putative zinc-type alcohol dehydrogenase K00100; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.475
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.