STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX22491.1Radical SAM domain family protein; KEGG: afu:AF1311 6.5e-18 oxygen-independent coproporphyrinogen III oxidase, putative; Psort location: Cytoplasmic, score: 8.87. (154 aa)    
Predicted Functional Partners:
EEX22490.1
Hypothetical protein.
       0.542
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
       0.468
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
   
  
 0.465
EEX22811.1
Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
  
   0.419
EEX22561.1
Rhodanese-like protein; KEGG: nme:NMB1023 5.2e-32 hypothetical protein K04075; Psort location: Cytoplasmic, score: 8.87; Belongs to the TtcA family.
   
 
 0.417
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
   0.416
EEX22489.1
Radical SAM domain protein; KEGG: afu:AF1311 2.9e-38 oxygen-independent coproporphyrinogen III oxidase, putative; Psort location: Cytoplasmic, score: 8.87.
 
    
0.410
Your Current Organism:
Blautia hansenii
NCBI taxonomy Id: 537007
Other names: B. hansenii DSM 20583, Blautia hansenii DSM 20583, Blautia hansenii str. DSM 20583, Blautia hansenii strain DSM 20583, Ruminococcus hansenii DSM 20583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.