STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX21710.1Transcriptional regulator, Spx/MgsR family; KEGG: fnu:FN0052 6.1e-38 arsenate reductase; Belongs to the ArsC family. (117 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.766
EEX21707.1
BioY family protein; KEGG: oih:OB1717 2.4e-20 biotin synthase K01012; Psort location: CytoplasmicMembrane, score: 9.99.
       0.737
EEX21708.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.737
EEX21709.1
Hemerythrin HHE cation binding domain protein; KEGG: mmu:66576 0.0065 Uqcrh; ubiquinol-cytochrome c reductase hinge protein K00416; Psort location: Cytoplasmic, score: 8.87.
       0.737
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.708
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.570
EEX21617.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
    
   0.555
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
   0.555
rpoD-2
RNA polymerase sigma factor RpoD; KEGG: mma:MM2623 7.1e-05 exosome complex exonuclease 1 K00989; Psort location: Cytoplasmic, score: 9.98; Belongs to the sigma-70 factor family.
    
   0.555
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.552
Your Current Organism:
Blautia hansenii
NCBI taxonomy Id: 537007
Other names: B. hansenii DSM 20583, Blautia hansenii DSM 20583, Blautia hansenii str. DSM 20583, Blautia hansenii strain DSM 20583, Ruminococcus hansenii DSM 20583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.