STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX21234.1Exonuclease; KEGG: cpe:CPE1691 1.7e-07 polC; DNA polymerase III alpha subunit K03763; Psort location: Cytoplasmic, score: 8.87. (320 aa)    
Predicted Functional Partners:
rplA
Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
    
  0.848
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
  0.752
rplB
Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
   
 
  0.728
EEX21391.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.711
EEX20665.1
Ribosomal protein L7Ae.
 
  
  0.677
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
    
  0.676
EEX22023.1
SH3 domain protein.
  
     0.590
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
 
  0.583
EEX23142.1
Hypothetical protein; KEGG: pol:Bpro_2546 2.1e-12 peptidase A24A, prepilin type IV K02278; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.578
EEX21060.1
Hypothetical protein; KEGG: bba:Bd0132 0.0016 predicted periplasmic solute-binding protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.557
Your Current Organism:
Blautia hansenii
NCBI taxonomy Id: 537007
Other names: B. hansenii DSM 20583, Blautia hansenii DSM 20583, Blautia hansenii str. DSM 20583, Blautia hansenii strain DSM 20583, Ruminococcus hansenii DSM 20583
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.