STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX20144.1KEGG: rba:RB818 3.8e-06 reverse transcriptase/maturase K00986. (133 aa)    
Predicted Functional Partners:
EEX20143.1
Hypothetical protein; KEGG: rba:RB818 1.5e-11 reverse transcriptase/maturase K00986; Psort location: Cytoplasmic, score: 8.87.
     0.986
EEX22970.1
Hypothetical protein.
 
    0.637
EEX22918.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
    0.552
cas2
CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
   
 
 0.515
EEX22733.1
Reverse transcriptase (RNA-dependent DNA polymerase); KEGG: bcz:pE33L466_0196 3.1e-41 RNA-directed DNA polymerase K00986.
  
     0.426
EEX20141.1
Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 7.63.
       0.426
EEX20142.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.423
EEX20145.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.421
LtrA
Reverse transcriptase (RNA-dependent DNA polymerase); KEGG: fra:Francci3_2318 1.0e-74 RNA-directed DNA polymerase K00986; Psort location: Cytoplasmic, score: 8.87.
  
     0.418
LtrA-2
Reverse transcriptase (RNA-dependent DNA polymerase); KEGG: pol:Bpro_5394 1.5e-82 RNA-directed DNA polymerase K00986; Psort location: Cytoplasmic, score: 8.87.
  
     0.413
Your Current Organism:
Blautia hansenii
NCBI taxonomy Id: 537007
Other names: B. hansenii DSM 20583, Blautia hansenii DSM 20583, Blautia hansenii str. DSM 20583, Blautia hansenii strain DSM 20583, Ruminococcus hansenii DSM 20583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.