STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36882.1Peptidase family M3; KEGG: bfs:BF0884 2.8e-239 dcp; putative peptidyl-dipeptidase K01284; Psort location: Cytoplasmic, score: 9.97. (695 aa)    
Predicted Functional Partners:
EFB36881.1
Cytidine and deoxycytidylate deaminase zinc-binding region; KEGG: bfr:BF0964 1.9e-57 deoxycytidylate deaminase K01493.
  
    0.826
EFB36880.1
Peptidase, S41 family; KEGG: bth:BT4259 5.7e-168 carboxy-terminal processing protease precursor K03797; Belongs to the peptidase S41A family.
  
    0.741
EFB36879.1
KEGG: bth:BT4258 5.9e-40 putative 5-formyltetrahydrofolate cyclo-ligase K01934; Psort location: Cytoplasmic, score: 8.96.
       0.740
EFB36883.1
Cyclic nucleotide-binding domain protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.664
EFB36884.1
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.587
EFB36885.1
Hypothetical protein.
       0.569
EFB36886.1
Hypothetical protein.
       0.569
EFB36887.1
KEGG: chu:CHU_1792 3.4e-92 b-glycosyltransferase, glycosyltransferase family 2 protein K00754; Psort location: CytoplasmicMembrane, score: 9.46.
       0.569
EFB36888.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
       0.538
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.