STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gapGlyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bth:BT4263 1.7e-136 glyceraldehyde 3-phosphate dehydrogenase K00134; Psort location: Cytoplasmic, score: 9.97; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (343 aa)    
Predicted Functional Partners:
pgk
KEGG: bth:BT1672 1.7e-152 phosphoglycerate kinase K00927; Psort location: Cytoplasmic, score: 9.26.
 
 0.999
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 0.999
fba
KEGG: bth:BT1691 1.5e-135 fructose-bisphosphate aldolase, class II K01624.
  
 0.987
pgi
KEGG: bfr:BF3812 1.0e-186 glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.26; Belongs to the GPI family.
  
 
 0.970
EFB36368.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: bth:BT0347 2.2e-285 transketolase K00615; Belongs to the transketolase family.
  
 0.948
EFB36491.1
KDPG and KHG aldolase; KEGG: bth:BT0489 1.2e-82 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase K01625:K01650; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.899
pyk
Pyruvate kinase; KEGG: bfr:BF4482 3.8e-148 pyruvate kinase K00873; Psort location: Cytoplasmic, score: 8.96.
 
 0.893
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
     
 0.888
pdxS
Pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.
 
  
 0.813
udk
Uridine kinase; KEGG: bfs:BF3035 1.5e-66 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.96.
   
 0.801
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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