STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36918.1Diacylglycerol kinase catalytic domain protein; KEGG: ana:all1876 3.9e-05 putative methylglyoxal synthase K01734. (309 aa)    
Predicted Functional Partners:
EFB34037.1
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: ana:all1876 3.3e-21 putative methylglyoxal synthase K01734; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.785
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
  0.774
EFB35600.1
KEGG: ehi:224.t00010 6.0e-09 leucine rich repeat protein K01768.
  
  
  0.659
miaA
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.651
EFB36492.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dvu:DVU2587 1.2e-13 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.46.
 
     0.620
EFB35282.1
PAP2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.617
EFB35094.1
Phosphate-selective porin O and P.
  
     0.587
EFB36493.1
Response regulator receiver domain protein; KEGG: ava:Ava_B0209 2.5e-08 two component transcriptional regulator, LuxR family K02479; Psort location: Cytoplasmic, score: 8.96.
  
     0.575
EFB33853.1
KEGG: hin:HI1272 1.1e-05 hypothetical ABC transporter ATP-binding protein HI1272 K02013.
  
     0.567
EFB33852.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.555
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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