STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36920.1Putative glycogen debranching enzyme, archaeal type; KEGG: ava:Ava_2025 2.4e-66 glycogen debranching enzyme K00705. (647 aa)    
Predicted Functional Partners:
EFB36921.1
Glycosyltransferase, group 1 family protein; KEGG: sat:SYN_00881 1.9e-82 4-alpha-glucanotransferase K00705.
 
  0.954
EFB36922.1
Glycosyl hydrolase, family 57; KEGG: pgi:PG1683 6.8e-110 hypothetical protein K07405.
 
 
 0.929
glgP
KEGG: bfr:BF2726 0. alpha-glucan phosphorylase K00688.
 
 0.910
EFB34180.1
Alpha amylase, catalytic domain protein; KEGG: bfr:BF2243 0. 1,4-alpha-glucan branching enzyme K00700; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.756
EFB33725.1
Starch synthase; KEGG: sat:SYN_00879 8.9e-96 glycogen synthase/glycogen phosphorylase K00688:K00693.
  
  0.662
EFB36919.1
Cyclic nucleotide-binding domain protein; KEGG: eci:UTI89_C3860 9.2e-05 crp; CRP-cAMP transcriptional dual regulator K00924; Psort location: Cytoplasmic, score: 8.96.
   
   0.655
pulA
Pullulanase, type I; KEGG: bth:BT4689 6.5e-160 pullulanase precursor K01200; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 13 family.
   
 0.488
EFB36952.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.454
EFB36265.1
KEGG: cyb:CYB_1515 2.3e-29 tetratricopeptide repeat/protein kinase domain protein K08884.
  
     0.445
pyk
Pyruvate kinase; KEGG: bfr:BF4482 3.8e-148 pyruvate kinase K00873; Psort location: Cytoplasmic, score: 8.96.
   
 0.441
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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