STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36921.1Glycosyltransferase, group 1 family protein; KEGG: sat:SYN_00881 1.9e-82 4-alpha-glucanotransferase K00705. (422 aa)    
Predicted Functional Partners:
EFB34180.1
Alpha amylase, catalytic domain protein; KEGG: bfr:BF2243 0. 1,4-alpha-glucan branching enzyme K00700; Psort location: Cytoplasmic, score: 8.96.
 
 0.973
EFB36920.1
Putative glycogen debranching enzyme, archaeal type; KEGG: ava:Ava_2025 2.4e-66 glycogen debranching enzyme K00705.
 
  0.954
EFB36922.1
Glycosyl hydrolase, family 57; KEGG: pgi:PG1683 6.8e-110 hypothetical protein K07405.
 
 
  0.935
EFB36304.1
Starch synthase catalytic domain protein; KEGG: chu:CHU_3836 4.7e-54 glgA; glycogen synthase-related protein K00703; Psort location: Cytoplasmic, score: 8.96.
     
 0.873
EFB34690.1
KEGG: bfr:BF3828 2.9e-253 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.26.
     
 0.873
EFB33725.1
Starch synthase; KEGG: sat:SYN_00879 8.9e-96 glycogen synthase/glycogen phosphorylase K00688:K00693.
  
  
  0.721
glgP
KEGG: bfr:BF2726 0. alpha-glucan phosphorylase K00688.
  
 0.676
EFB36919.1
Cyclic nucleotide-binding domain protein; KEGG: eci:UTI89_C3860 9.2e-05 crp; CRP-cAMP transcriptional dual regulator K00924; Psort location: Cytoplasmic, score: 8.96.
       0.609
EFB34529.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 1.0e-67 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100.
  
 
 0.538
EFB33879.1
Gram-positive signal peptide protein, YSIRK family; KEGG: tde:TDE0187 0.00017 carboxylesterase, putative K03928.
    
   0.514
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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