STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpFKEGG: bfr:BF2655 1.2e-48 putative N-(5'-phosphoribosyl)anthranilate isomerase K01817; Psort location: Cytoplasmic, score: 8.96; Belongs to the TrpF family. (206 aa)    
Predicted Functional Partners:
trpC
KEGG: bth:BT0529 6.2e-68 indole-3-glycerol phosphate synthase K01609; Psort location: Cytoplasmic, score: 8.96; Belongs to the TrpC family.
 
 0.999
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
 
 0.999
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
 
 0.999
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
 
 
 0.998
EFB36949.1
Glutamine amidotransferase, class I; KEGG: bth:BT0531 1.6e-69 anthranilate synthase component II K01658; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.985
EFB36948.1
Chorismate binding enzyme; KEGG: bfs:BF2673 1.3e-168 trpE; anthranilate synthase component I K01657; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.941
EFB36059.1
KEGG: bfs:BF2335 1.4e-54 putative para-aminobenzoate synthase component I K01665; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.831
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.816
EFB34481.1
KEGG: bth:BT2403 1.8e-299 homoserine dehydrogenase.
    
 0.792
EFB36062.1
Hypothetical protein; KEGG: bfr:BF2239 4.4e-05 putative para-aminobenzoate synthase component I K01665; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.668
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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