STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36843.1Hypothetical protein; KEGG: tma:TM1751 0.0033 endoglucanase K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (428 aa)    
Predicted Functional Partners:
EFB34718.1
GDSL-like protein; KEGG: chu:CHU_0721 4.0e-25 hypothetical protein K01238.
 
  
 0.937
EFB36836.1
Cellulase (glycosyl hydrolase family 5); KEGG: sde:Sde_2636 9.8e-38 DNA mismatch repair protein K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.860
celA
KEGG: sde:Sde_2636 2.4e-50 DNA mismatch repair protein K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.834
EFB36845.1
Putative endoglucanase A; KEGG: sde:Sde_2636 2.0e-62 DNA mismatch repair protein K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.779
EFB36950.1
KEGG: bth:BT2493 3.3e-110 ROK family transcriptional repressor, with glucokinase domain K00845; Psort location: Cytoplasmic, score: 9.26.
  
 
  0.732
EFB36005.1
Pectinesterase; KEGG: sus:Acid_1249 5.7e-58 pectinesterase K01051; Psort location: Extracellular, score: 9.71.
  
  
 0.718
EFB36937.1
Glycosyl hydrolase, family 88; KEGG: tma:TM0437 3.0e-75 exo-poly-alpha-D-galacturonosidase, putative K01238; Psort location: Extracellular, score: 9.71; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.715
EFB36932.1
Pectinesterase; KEGG: chu:CHU_0744 9.4e-07 CHU large protein K01238; Psort location: Extracellular, score: 9.96.
 
  
 0.711
EFB36837.1
Hypothetical protein; KEGG: bfr:BF0846 3.2e-32 mannan endo-1,4-beta-mannosidase K01218; Belongs to the glycosyl hydrolase 26 family.
 
  
 0.692
EFB35737.1
Nucleotide sugar dehydrogenase; KEGG: spr:spr0318 4.5e-168 cps2K; UDPglucose 6-dehydrogenase K00012.
    
  0.683
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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